The complete mitochondrial genome of a new deep-sea hagfish Eptatretus sp. Nan-Hai (Myxinidae: Eptatretus) from the South China Sea
Lian, Chun-Ang1,2; Li, Jun-Yuan1; Zhu, Fang-Chao1,2; Li, Jun1; He, Li-Sheng1
2020-01-02
Source PublicationMITOCHONDRIAL DNA PART B-RESOURCES
Volume5Issue:1Pages:619-620
Abstract

In this study, the complete mitochondrial DNA sequence of a hagfish Eptatretus sp. Nan-Hai from a depth of 1000 m is presented. The complete sequence was determined using next-generation sequencing and long PCRs. The mitochondrial genome of Eptatretus sp. Nan-Hai is 17,538 bps in size and composed of 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes, and one control region (D-loop). The base composition of mitochondrial genome is biased toward A + T content, at 67.21%, with GC skew of -0.35 and AT skew of -0.03. A phylogenetic tree revealed that within the genus Eptatretus, Eptatretus sp. Nan-Hai is closely related to Eptatretus atami.

KeywordMitochondrial genome deep sea hagfish
DOI10.1080/23802359.2019.1711220
Indexed BySCI
Funding OrganizationNational Key Research and Development Program of China
Language英语
Funding ProjectNational Key Research and Development Program of China[2016YFC0304905]
WOS Research AreaGenetics & Heredity
WOS SubjectGenetics & Heredity
WOS IDWOS:000507596700001
PublisherTAYLOR & FRANCIS LTD
Citation statistics
Document Type期刊论文
Version出版稿
Identifierhttp://ir.idsse.ac.cn/handle/183446/7393
Collection深海科学研究部_深海生物学研究室_深海生物蛋白质组学及分子生物学研究组
深海工程技术部_深海探测技术研究室
Corresponding AuthorHe, Li-Sheng
Affiliation1.Chinese Acad Sci, Inst Deep Sea Sci & Engn, Sanya 572000, Hainan, Peoples R China
2.Univ Chinese Acad Sci, Coll Earth Sci, Beijing, Peoples R China
First Author AffilicationInstitute of Deep-sea Science and Engineering,CAS
Corresponding Author AffilicationInstitute of Deep-sea Science and Engineering,CAS
Recommended Citation
GB/T 7714
Lian, Chun-Ang,Li, Jun-Yuan,Zhu, Fang-Chao,et al. The complete mitochondrial genome of a new deep-sea hagfish Eptatretus sp. Nan-Hai (Myxinidae: Eptatretus) from the South China Sea[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2020,5(1):619-620.
APA Lian, Chun-Ang,Li, Jun-Yuan,Zhu, Fang-Chao,Li, Jun,&He, Li-Sheng.(2020).The complete mitochondrial genome of a new deep-sea hagfish Eptatretus sp. Nan-Hai (Myxinidae: Eptatretus) from the South China Sea.MITOCHONDRIAL DNA PART B-RESOURCES,5(1),619-620.
MLA Lian, Chun-Ang,et al."The complete mitochondrial genome of a new deep-sea hagfish Eptatretus sp. Nan-Hai (Myxinidae: Eptatretus) from the South China Sea".MITOCHONDRIAL DNA PART B-RESOURCES 5.1(2020):619-620.
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